Project Group: org.eurekaclinical

AIW OMOP ETL

org.eurekaclinical : aiw-omop-etl

AIW OMOP ETL is a Protempa query results handler for loading data and abstractions into OMOP.

Last Version: 0.0.5

Release Date: Apr 16, 2021

Eureka! Clinical Protempa Service

org.eurekaclinical : eurekaclinical-protempa-service

Eureka Protempa ETL is the backend data processing layer of Eureka! Clinical Analytics. It performs clinical phenotyping using the Protempa software framework. It currently loads data and found phenotypes into an i2b2 project, though ultimately it will support other export formats.

Last Version: 3.1-Alpha-6

Release Date: Apr 16, 2021

Eureka! Clinical Analytics Service

org.eurekaclinical : eurekaclinical-analytics-service

Eureka! Clinical Analytics Services is the middle services layer of the Eureka! Clinical Analytics application.

Last Version: 3.1-Alpha-5

Release Date: Apr 16, 2021

Eureka! Clinical Analytics WebApp

org.eurekaclinical : eurekaclinical-analytics-webapp

Eureka! Clinical Analytics WebApp is the implementation of the Eureka! Clinical Analytics web user interface.

Last Version: 3.1-Alpha-6

Release Date: Apr 16, 2021

Eureka! Clinical Admin Webapp

org.eurekaclinical : eurekaclinical-admin-webapp

Eureka! Clinical Admin Webapp is the implementation of Eureka! Clinical Admin web interface to manage users of Eureka! Clinical multiple projects

Last Version: 2.8

Release Date: Apr 16, 2021

AIW i2b2 ETL

org.eurekaclinical : aiw-i2b2-etl

AIW i2b2 ETL is a Protempa query results handler for loading data and abstractions into i2b2.

Last Version: 4.7

Release Date: Jan 12, 2021

Eureka! Clinical User Service

org.eurekaclinical : eurekaclinical-user-service

Eureka! Clinical User Services is the implementation of Eureka! Clinical User web interface that is used by Eureka! Clinical multiple projects

Last Version: 2.6

Release Date: Dec 3, 2020

Eureka! Clinical User Webapp

org.eurekaclinical : eurekaclinical-user-webapp

Eureka! Clinical User Webapp is the implementation of Eureka! Clinical User web interface that is used by Eureka! Clinical multiple projects

Last Version: 2.5

Release Date: Dec 3, 2020

Eureka! Clinical i2b2 Integration Service

org.eurekaclinical : eurekaclinical-i2b2-integration-service

A service that provides REST endpoints for the i2b2 data export plugin. It supports exporting an i2b2 patient set with a user-defined configuration, as well as saving configurations.

Last Version: 2.1-Alpha-3

Release Date: Nov 16, 2020

Eureka! Clinical I2b2 Integration Webapp

org.eurekaclinical : eurekaclinical-i2b2-integration-webapp

Provides a proxy for accessing i2b2 integration services.

Last Version: 2.2-Alpha-2

Release Date: Nov 16, 2020

eurekaclinical-phenotype-service

org.eurekaclinical : eurekaclinical-phenotype-service

Parent pom.xml for all Eureka! Clinical projects with standard dependencies

Last Version: 1.1-Alpha-4

Release Date: Nov 16, 2020

Eureka! Client

org.eurekaclinical : eureka-client

Client for accessing Eureka!'s web services.

Last Version: 5.1-Alpha-4

Release Date: Nov 12, 2020

Eureka! Clinical Protempa Client

org.eurekaclinical : eurekaclinical-protempa-client

Parent pom.xml for all Eureka! Clinical projects with standard dependencies

Last Version: 3.1-Alpha-4

Release Date: Nov 12, 2020

Eureka! Clinical Phenotype Client

org.eurekaclinical : eurekaclinical-phenotype-client

Parent pom.xml for all Eureka! Clinical projects with standard dependencies

Last Version: 1.1-Alpha-4

Release Date: Nov 12, 2020

i2b2 Client

org.eurekaclinical : i2b2-client

Library for making web services calls to an instance of i2b2.

Last Version: 2.3

Release Date: Aug 13, 2020

Eureka Clinical i2b2 Integration Client

org.eurekaclinical : eurekaclinical-i2b2-integration-client

Client for accessing Eureka!'s i2b2 integration services.

Last Version: 2.2-Alpha-1

Release Date: Aug 13, 2020

Eureka! Clinical User Agreement Webapp

org.eurekaclinical : eurekaclinical-user-agreement-webapp

Presents a user agreement to users.

Last Version: 3.1-Alpha-1

Release Date: Aug 13, 2020

Eureka! Clinical User Agreement Service

org.eurekaclinical : eurekaclinical-user-agreement-service

Provides a REST API for checking whether a logged-in user has agreed to a user agreement.

Last Version: 3.2-Alpha-2

Release Date: Aug 13, 2020

Eureka! Clinical Analytics Web Client

org.eurekaclinical : eurekaclinical-analytics-webclient

Eureka! Clinical Analytics is a web application that provides you with an easy way to phenotype a patient population based on their clinical and administrative data, and load those phenotypes and data into your own instance of the i2b2 data warehouse system.

Last Version: 2.1-Alpha-5

Release Date: Aug 13, 2020

Eureka! Clinical User Web Client

org.eurekaclinical : eurekaclinical-user-webclient

Parent pom.xml for all Eureka! Clinical projects.

Last Version: 1.6

Release Date: Aug 13, 2020

Eureka! Clinical Admin Web Client

org.eurekaclinical : eurekaclinical-admin-webclient

Parent pom.xml for all Eureka! Clinical projects.

Last Version: 1.4

Release Date: Aug 13, 2020

Eureka! Clinical Registry Client

org.eurekaclinical : eurekaclinical-registry-client

Parent pom.xml for all Eureka! Clinical projects with standard dependencies

Last Version: 1.6-Alpha-2

Release Date: Aug 12, 2020

Eureka! Clinical User Client

org.eurekaclinical : eurekaclinical-user-client

Eureka! Clinical User Client is a library of shared client obejcts for the other modules of the Eureka! Clinical User project.

Last Version: 1.7

Release Date: Aug 12, 2020

AIW Neo4j ETL

org.eurekaclinical : aiw-neo4j-etl

AIW Neo4j ETL is a Protempa query results handler for loading data and abstractions into the Neo4j graph database.

Last Version: 4.5

Release Date: Aug 12, 2020

Eureka! Clinical User Agreement Client

org.eurekaclinical : eurekaclinical-user-agreement-client

Client for the User Agreement components.

Last Version: 2.4-Alpha-2

Release Date: Aug 12, 2020

Eureka! Clinical Registry Service

org.eurekaclinical : eurekaclinical-registry-service

Parent pom.xml for all Eureka! Clinical projects with standard dependencies

Last Version: 1.5-Alpha-2

Release Date: Aug 12, 2020

ScribeUP Extensions

org.eurekaclinical : scribe-up-ext

This code library updates and adds OAuth providers to the base ScribeUP library, available from https://github.com/PeterKnego/scribe-up.

Last Version: 2.4

Release Date: Aug 12, 2020

ETL Common

org.eurekaclinical : etl-common

Includes Interfaces and Classes used by ETLs

Last Version: 0.0.5

Release Date: Aug 12, 2020

Eureka! Clinical User Common

org.eurekaclinical : eurekaclinical-user-common

Eureka! Clinical User Common is a library of shared functionality for the other modules of the Eureka! Clinical User project.

Last Version: 1.7

Release Date: Aug 12, 2020

Protempa Framework

org.eurekaclinical : protempa-framework

Protempa Framework is the core of Protempa.

Last Version: 5.2-Alpha-2

Release Date: Aug 11, 2020

JavaUtil

org.eurekaclinical : javautil

JavaUtil is a utility library to speed the development of Java software. We developed it over multiple years during our internal development efforts, and it has reached a point of stability where we have decided to make it available to the outside world. The JavaUtil package aims to fill in the gaps of the Apache Commons and similar utility libraries out there. Features include convenience classes for string, collections, arrays, dates, iterators, colors, logging, unit testing, a little bit of basic statistics, database queries, caching and more.

Last Version: 4.5

Release Date: Aug 11, 2020

Protempa Relational Database Data Source Backend

org.eurekaclinical : protempa-dsb-relationaldb

Implements support for retrieving data from relational databases.

Last Version: 5.2-Alpha-2

Release Date: Aug 11, 2020

Protempa Ini4j INI Backend Configurations

org.eurekaclinical : protempa-bconfigs-ini4j-ini

Protempa Ini4j INI Backend Configurations implements an INI configuration mechanism for Protempa.

Last Version: 5.2-Alpha-2

Release Date: Aug 11, 2020

Protempa ServiceLoader Backend Provider

org.eurekaclinical : protempa-bp-serviceloader

Provides support for implementing Protempa backends using the Java ServiceLoader mechanism.

Last Version: 5.2-Alpha-2

Release Date: Aug 11, 2020

Datastore

org.eurekaclinical : datastore

Implements a key-value store API using Berkeley DB

Last Version: 3.3

Release Date: Aug 11, 2020

Protempa ServiceLoader Backend Configurations Provider

org.eurekaclinical : protempa-bcp-serviceloader

Provides support for implementing Protempa configuration backends using the Java ServiceLoader mechanism.

Last Version: 5.2-Alpha-2

Release Date: Aug 11, 2020

Protempa Test Suite

org.eurekaclinical : protempa-test-suite

For running end-to-end regression and integration tests against Protempa

Last Version: 5.2-Alpha-2

Release Date: Aug 11, 2020

Protempa Protege Knowledge Source Backend

org.eurekaclinical : protempa-ksb-protege

Implements Protege ontology support for specifying temporal abstractions.

Last Version: 5.2-Alpha-2

Release Date: Aug 11, 2020

Protempa File Data Source Backend

org.eurekaclinical : protempa-dsb-file

Implements support for retrieving data from files.

Last Version: 5.2-Alpha-2

Release Date: Aug 11, 2020

Eureka! Clinical Patient Set Client

org.eurekaclinical : eurekaclinical-patient-set-client

Client for the Patient Set components.

Last Version: 2.6

Release Date: Aug 11, 2020

Protempa

org.eurekaclinical : protempa

Protempa supports the construction of software systems for querying clinical databases, summarizing patient data, detecting clinically significant data patterns in groups of patients or individual patients, and extract, transform and load (ETL). Its special feature, temporal abstraction, supports queries and summarization of data in terms of temporal patterns. Temporal patterns enable robust querying and extraction of clinical history. These patterns include frequencies (at least two, three, etc. of some event or observation); sequences (chemotherapy followed by surgery within 180 days, a hospital encounter followed by another hospital encounter within 30 days); and overlaps (falling platelet counts in the setting of HELLP syndrome).

Last Version: 5.2-Alpha-2

Release Date: Aug 11, 2020

CAS Mock

org.eurekaclinical : cas-mock

Mock CAS Server for use in testing.

Last Version: 2.4

Release Date: Aug 11, 2020

Eureka! Clinical Common

org.eurekaclinical : eurekaclinical-common

A library of classes shared across the Eureka! Clinical platform.

Last Version: 5.1-Alpha-1

Release Date: Aug 10, 2020

Eureka! Clinical Standard APIs

org.eurekaclinical : eurekaclinical-standard-apis

A library of classes shared across the Eureka! Clinical platform.

Last Version: 4.1-Alpha-1

Release Date: Aug 10, 2020

Eureka! Clinical Ontology Installation Files

org.eurekaclinical : eurekaclinical-ontology

Ontology liquibase files.

Last Version: 2.0.5

Release Date: Aug 10, 2020

Eureka! Clinical Parent

org.eurekaclinical : eurekaclinical-parent

Parent pom.xml for all Eureka! Clinical projects.

Last Version: 4-Alpha-9

Release Date: Aug 10, 2020

Eureka! Clinical Parent with Standard Dependencies

org.eurekaclinical : eurekaclinical-parent-standard-deps

Parent pom.xml for all Eureka! Clinical projects with standard dependencies

Last Version: 4-Alpha-4

Release Date: Aug 10, 2020

Eureka! Clinical Parent Extras for CAS

org.eurekaclinical : eurekaclinical-parent-cas

Parent pom.xml for all CAS-related Eureka! Clinical projects

Last Version: 4-Alpha-3

Release Date: Jul 30, 2018

MIMIC II Data Source Backend

org.eurekaclinical : aiw-mimicii-dsb

Parent pom.xml for all Eureka! Clinical projects.

Last Version: 3.0-Alpha-1

Release Date: Jul 17, 2018

Protempa UMLS Term Source Backend

org.eurekaclinical : protempa-tsb-umls

Implements support for using the UMLS for access to clinical terms.

Last Version: 4.3.2

Release Date: Jun 29, 2018