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InterProScan

InterProScan is the software package that allows sequences (protein and nucleic) to be scanned against InterPro's signatures.

Лицензия

Лицензия
Группа

Группа

uk.ac.ebi.interpro.scan
Идентификатор

Идентификатор

interproscan
Последняя версия

Последняя версия

5.36-75.0
Дата

Дата
Тип

Тип

pom
Описание

Описание

InterProScan
InterProScan is the software package that allows sequences (protein and nucleic) to be scanned against InterPro's signatures.
Ссылка на сайт

Ссылка на сайт

http://www.ebi.ac.uk/interpro/
Организация-разработчик

Организация-разработчик

European Bioinformatics Institute
Система контроля версий

Система контроля версий

https://github.com/ebi-pf-team/interproscan.git

Скачать interproscan

Имя Файла Размер
interproscan-5.36-75.0.pom 16 KB
Обзор

Как подключить последнюю версию

<!-- https://jarcasting.com/artifacts/uk.ac.ebi.interpro.scan/interproscan/ -->
<dependency>
    <groupId>uk.ac.ebi.interpro.scan</groupId>
    <artifactId>interproscan</artifactId>
    <version>5.36-75.0</version>
    <type>pom</type>
</dependency>
// https://jarcasting.com/artifacts/uk.ac.ebi.interpro.scan/interproscan/
implementation 'uk.ac.ebi.interpro.scan:interproscan:5.36-75.0'
// https://jarcasting.com/artifacts/uk.ac.ebi.interpro.scan/interproscan/
implementation ("uk.ac.ebi.interpro.scan:interproscan:5.36-75.0")
'uk.ac.ebi.interpro.scan:interproscan:pom:5.36-75.0'
<dependency org="uk.ac.ebi.interpro.scan" name="interproscan" rev="5.36-75.0">
  <artifact name="interproscan" type="pom" />
</dependency>
@Grapes(
@Grab(group='uk.ac.ebi.interpro.scan', module='interproscan', version='5.36-75.0')
)
libraryDependencies += "uk.ac.ebi.interpro.scan" % "interproscan" % "5.36-75.0"
[uk.ac.ebi.interpro.scan/interproscan "5.36-75.0"]

Зависимости

compile (10)

Идентификатор библиотеки Тип Версия
log4j : log4j jar 1.2.14
org.slf4j : slf4j-log4j12 jar 1.7.13
commons-logging : commons-logging jar 1.1.1
org.springframework : spring-jdbc jar 4.2.2.RELEASE
org.springframework : spring-context jar 4.2.2.RELEASE
org.springframework : spring-core jar 4.2.2.RELEASE
org.springframework : spring-orm jar 4.2.2.RELEASE
org.springframework : spring-test jar 4.2.2.RELEASE
commons-io : commons-io jar 2.1
joda-time : joda-time jar 2.1

test (1)

Идентификатор библиотеки Тип Версия
junit : junit jar 4.12

Модули Проекта

  • util
  • generic-jpa-dao
  • model
  • io
  • persistence
  • business
  • web
  • management
  • jms-implementation
  • precalcmatches

interproscan

What is InterProScan?

InterPro is a database which integrates together predictive information about proteins' function from a number of partner resources, giving an overview of the families that a protein belongs to and the domains and sites it contains.

Users who have novel nucleotide or protein sequences that they wish to functionally characterise can use the software package InterProScan to run the scanning algorithms from the InterPro database in an integrated way. Sequences are submitted in FASTA format. Matches are then calculated against all of the required member database's signatures and the results are then output in a variety of formats.

Documentation

For more information on downloading, installing and running InterProScan please see the InterProScan readthedocs.

Contact us

For further assistance please contact us.

uk.ac.ebi.interpro.scan

Версии библиотеки

Версия
5.36-75.0
5.35-74.0
5.34-73.0
5.33-72.0
5.32-71.0
5.31-70.0
5.30-69.0
5.29-68.0
5.28-67.0
5.27-66.0
5.26-65.0
5.25-64.0
5.24-63.0
5.23-62.0
5.22-61.0
5.21-60.0
5.19-58.0